Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 AC128676.1-201ENST00000454392 318 ntBASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 PLK5-205ENST00000642079 1969 ntBASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHB11Q9Y5F2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 AC100791.3-201ENST00000617619 330 ntBASIC19.83■□□□□ 0.77
PCDHB11Q9Y5F2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDHB11Q9Y5F2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PCDHB11Q9Y5F2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDHB11Q9Y5F2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDHB11Q9Y5F2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB11Q9Y5F2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.83■□□□□ 0.76
PCDHB11Q9Y5F2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB11Q9Y5F2 SLC25A24-204ENST00000569674 2357 ntBASIC19.83■□□□□ 0.76
PCDHB11Q9Y5F2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 RPS2P4-201ENST00000476944 856 ntBASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDHB11Q9Y5F2 AC006128.1-201ENST00000624704 1661 ntBASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 AC026366.1-201ENST00000488803 879 ntBASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB11Q9Y5F2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms