Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 SMG8-203ENST00000578922 2178 ntBASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGC3Q9UN70 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGC3Q9UN70 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 GUSBP6-202ENST00000438529 1198 ntBASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGC3Q9UN70 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 AC073130.3-201ENST00000624389 2278 ntBASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 PTBP1P-201ENST00000554374 1601 ntBASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGC3Q9UN70 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC3Q9UN70 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC3Q9UN70 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC3Q9UN70 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC3Q9UN70 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC3Q9UN70 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGC3Q9UN70 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 GPX1P1-201ENST00000388829 606 ntBASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 LSM12P1-201ENST00000411836 588 ntBASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 BX276092.2-201ENST00000417668 665 ntBASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 C2orf69P4-201ENST00000565394 541 ntBASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 AC099778.1-201ENST00000568593 1911 ntBASIC21.39■■□□□ 1.01
PCDHGC3Q9UN70 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 MIPEPP3-201ENST00000412105 444 ntBASIC21.38■■□□□ 1.01
PCDHGC3Q9UN70 TSPY6P-201ENST00000448518 926 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms