Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRDM4Q9UKN5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRDM4Q9UKN5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
PRDM4Q9UKN5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRDM4Q9UKN5 AC093484.2-201ENST00000580996 2166 ntBASIC20.89■□□□□ 0.94
PRDM4Q9UKN5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.89■□□□□ 0.94
PRDM4Q9UKN5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 AC103724.3-201ENST00000564481 992 ntBASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM4Q9UKN5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 AC004448.1-201ENST00000458332 883 ntBASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.88■□□□□ 0.93
PRDM4Q9UKN5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 AC131274.2-201ENST00000580697 1507 ntBASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
PRDM4Q9UKN5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM4Q9UKN5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 AL031848.2-201ENST00000607670 837 ntBASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.85■□□□□ 0.93
PRDM4Q9UKN5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms