Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 AC004854.2-201ENST00000608450 1441 ntBASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
VTI1BQ9UEU0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 RARRES2P11-201ENST00000635158 484 ntBASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 MIR2861-201ENST00000636310 90 ntBASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.87■□□□□ 0.77
VTI1BQ9UEU0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VTI1BQ9UEU0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 AC245052.3-201ENST00000450182 901 ntBASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 KRT18P61-201ENST00000585825 1298 ntBASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.85■□□□□ 0.77
VTI1BQ9UEU0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VTI1BQ9UEU0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms