Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00474Q9P2X8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00474Q9P2X8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00474Q9P2X8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00474Q9P2X8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00474Q9P2X8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 AC091799.1-201ENST00000422823 811 ntBASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 AC092666.2-201ENST00000613287 246 ntBASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 AC100791.3-201ENST00000617619 330 ntBASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00474Q9P2X8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 AC004911.1-201ENST00000416316 871 ntBASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 DUX4L16-201ENST00000555130 1264 ntBASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 OR10C1-204ENST00000622521 1039 ntBASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00474Q9P2X8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00474Q9P2X8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 AC026185.1-201ENST00000445748 174 ntBASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 AC026471.1-201ENST00000564629 3026 ntBASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.14□□□□□ -0.31
LINC00474Q9P2X8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00474Q9P2X8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms