Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.99■□□□□ 0.31
KCNIP1Q9NZI2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 CDV3P1-201ENST00000471403 739 ntBASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.98■□□□□ 0.31
KCNIP1Q9NZI2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 RBM17P2-201ENST00000616397 1405 ntBASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 AL121603.2-201ENST00000557373 2117 ntBASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KCNIP1Q9NZI2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 AL512408.1-201ENST00000569378 2000 ntBASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 ZNRF2P3-201ENST00000424200 374 ntBASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 FAM21FP-204ENST00000608637 956 ntBASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNIP1Q9NZI2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KCNIP1Q9NZI2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
KCNIP1Q9NZI2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KCNIP1Q9NZI2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms