Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PARPBPQ9NWS1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.08■□□□□ 0.49
PARPBPQ9NWS1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.08■□□□□ 0.49
PARPBPQ9NWS1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PARPBPQ9NWS1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 AL355472.2-201ENST00000422958 438 ntBASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 GUSBP6-202ENST00000438529 1198 ntBASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 AC092118.2-201ENST00000613495 667 ntBASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PARPBPQ9NWS1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 AC073210.2-201ENST00000430369 194 ntBASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 AC105020.6-201ENST00000621523 1217 ntBASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 AC133041.1-202ENST00000642053 222 ntBASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PARPBPQ9NWS1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 AL138781.1-201ENST00000566567 1274 ntBASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PARPBPQ9NWS1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms