Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 C2orf69P4-201ENST00000565394 541 ntBASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ECHDC1Q9NTX5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 DUSP5P2-201ENST00000426873 1033 ntBASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 AC098934.4-201ENST00000564127 592 ntBASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 LINC01521-201ENST00000504184 1943 ntBASIC24.73■■□□□ 1.55
ECHDC1Q9NTX5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.72■■□□□ 1.55
ECHDC1Q9NTX5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 AC091874.3-201ENST00000512672 1195 ntBASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 DPP3P2-201ENST00000416030 1696 ntBASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 AL512408.1-201ENST00000569378 2000 ntBASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
ECHDC1Q9NTX5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.55
ECHDC1Q9NTX5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ECHDC1Q9NTX5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.7■■□□□ 1.55
ECHDC1Q9NTX5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ECHDC1Q9NTX5 AL162377.1-201ENST00000618844 1793 ntBASIC24.7■■□□□ 1.55
ECHDC1Q9NTX5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 AL355802.2-201ENST00000402069 882 ntBASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 AC073210.2-201ENST00000430369 194 ntBASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.7■■□□□ 1.54
ECHDC1Q9NTX5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 SMG8-203ENST00000578922 2178 ntBASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 AC069152.1-201ENST00000438030 544 ntBASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
ECHDC1Q9NTX5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ECHDC1Q9NTX5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
ECHDC1Q9NTX5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
ECHDC1Q9NTX5 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.68■■□□□ 1.54
ECHDC1Q9NTX5 MYC-209ENST00000641252 345 ntBASIC24.68■■□□□ 1.54
ECHDC1Q9NTX5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms