Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HOMER3Q9NSC5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 SLC7A5P1-201ENST00000568957 537 ntBASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HOMER3Q9NSC5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 AC123595.1-201ENST00000440769 1046 ntBASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HOMER3Q9NSC5 KRT8P36-201ENST00000489121 1440 ntBASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.04■□□□□ 0.96
HOMER3Q9NSC5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 SMG8-203ENST00000578922 2178 ntBASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 AC007322.3-201ENST00000426526 701 ntBASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.03■□□□□ 0.96
HOMER3Q9NSC5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 AC091799.1-201ENST00000422823 811 ntBASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 AC105265.2-201ENST00000467189 838 ntBASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 FAM21FP-204ENST00000608637 956 ntBASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 AC005837.3-201ENST00000612163 286 ntBASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOMER3Q9NSC5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms