Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CDC42SE1Q9NRR8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CDC42SE1Q9NRR8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 SIRPAP1-201ENST00000448467 1770 ntBASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 AC007326.2-201ENST00000624224 7579 ntBASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE1Q9NRR8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CDC42SE1Q9NRR8 AL161729.1-201ENST00000604104 1402 ntBASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE1Q9NRR8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms