Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.82■□□□□ 0.6
CTPS2Q9NRF8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTPS2Q9NRF8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CTPS2Q9NRF8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CTPS2Q9NRF8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTPS2Q9NRF8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTPS2Q9NRF8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTPS2Q9NRF8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.82■□□□□ 0.6
CTPS2Q9NRF8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 AC099778.1-201ENST00000568593 1911 ntBASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 AC092720.2-201ENST00000602388 1665 ntBASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTPS2Q9NRF8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 AL162377.1-201ENST00000618844 1793 ntBASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.8■□□□□ 0.6
CTPS2Q9NRF8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 AC116050.2-201ENST00000612102 1779 ntBASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 AC016769.1-201ENST00000409132 1010 ntBASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.79■□□□□ 0.6
CTPS2Q9NRF8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 RBM17P2-201ENST00000616397 1405 ntBASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTPS2Q9NRF8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 SMG8-203ENST00000578922 2178 ntBASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms