Protein–RNA interactions for Protein: Q9NQ75

CASS4, Cas scaffolding protein family member 4, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASS4Q9NQ75 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CASS4Q9NQ75 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CASS4Q9NQ75 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASS4Q9NQ75 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASS4Q9NQ75 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASS4Q9NQ75 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASS4Q9NQ75 AL391422.3-201ENST00000603791 2761 ntBASIC20.56■□□□□ 0.88
CASS4Q9NQ75 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CASS4Q9NQ75 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.55■□□□□ 0.88
CASS4Q9NQ75 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.55■□□□□ 0.88
CASS4Q9NQ75 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 AC016405.3-201ENST00000607710 860 ntBASIC20.54■□□□□ 0.88
CASS4Q9NQ75 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.54■□□□□ 0.88
CASS4Q9NQ75 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 AC006015.1-201ENST00000429970 570 ntBASIC20.53■□□□□ 0.88
CASS4Q9NQ75 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 SMG8-203ENST00000578922 2178 ntBASIC20.53■□□□□ 0.88
CASS4Q9NQ75 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 AC087633.2-202ENST00000565166 1439 ntBASIC20.53■□□□□ 0.88
CASS4Q9NQ75 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASS4Q9NQ75 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 AC004911.1-201ENST00000416316 871 ntBASIC20.52■□□□□ 0.88
CASS4Q9NQ75 DUX4L16-201ENST00000555130 1264 ntBASIC20.52■□□□□ 0.88
CASS4Q9NQ75 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.52■□□□□ 0.88
CASS4Q9NQ75 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CASS4Q9NQ75 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CASS4Q9NQ75 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CASS4Q9NQ75 AC112907.3-201ENST00000577781 2400 ntBASIC20.52■□□□□ 0.87
CASS4Q9NQ75 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.51■□□□□ 0.87
CASS4Q9NQ75 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CASS4Q9NQ75 CYP21A1P-202ENST00000354927 1481 ntBASIC20.51■□□□□ 0.87
CASS4Q9NQ75 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CASS4Q9NQ75 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms