Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 OR2I1P-207ENST00000453522 948 ntBASIC18.36■□□□□ 0.53
HMG20AQ9NP66 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 AP004607.7-201ENST00000527152 1677 ntBASIC18.36■□□□□ 0.53
HMG20AQ9NP66 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 MIR4466-201ENST00000606121 54 ntBASIC18.36■□□□□ 0.53
HMG20AQ9NP66 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HMG20AQ9NP66 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 AC121338.2-201ENST00000622535 1744 ntBASIC18.35■□□□□ 0.53
HMG20AQ9NP66 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 AC068587.7-201ENST00000641602 218 ntBASIC18.35■□□□□ 0.53
HMG20AQ9NP66 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.35■□□□□ 0.53
HMG20AQ9NP66 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.34■□□□□ 0.53
HMG20AQ9NP66 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 DUX4L19-201ENST00000557448 1267 ntBASIC18.34■□□□□ 0.53
HMG20AQ9NP66 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.34■□□□□ 0.53
HMG20AQ9NP66 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMG20AQ9NP66 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 AC131281.2-201ENST00000520478 145 ntBASIC18.33■□□□□ 0.52
HMG20AQ9NP66 AC079089.2-201ENST00000531211 1277 ntBASIC18.33■□□□□ 0.52
HMG20AQ9NP66 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 AL138724.1-201ENST00000606771 1088 ntBASIC18.33■□□□□ 0.52
HMG20AQ9NP66 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 SYT6-210ENST00000641643 1587 ntBASIC18.33■□□□□ 0.52
HMG20AQ9NP66 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 LTB4R2-202ENST00000528054 3092 ntBASIC18.33■□□□□ 0.52
HMG20AQ9NP66 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMG20AQ9NP66 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.32■□□□□ 0.52
HMG20AQ9NP66 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms