Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.13■□□□□ 0.33
HES4Q9HCC6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.13■□□□□ 0.33
HES4Q9HCC6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HES4Q9HCC6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.13■□□□□ 0.33
HES4Q9HCC6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HES4Q9HCC6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.13■□□□□ 0.33
HES4Q9HCC6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HES4Q9HCC6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HES4Q9HCC6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.13■□□□□ 0.33
HES4Q9HCC6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HES4Q9HCC6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HES4Q9HCC6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
HES4Q9HCC6 AL512408.1-201ENST00000569378 2000 ntBASIC17.13■□□□□ 0.33
HES4Q9HCC6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.13■□□□□ 0.33
HES4Q9HCC6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HES4Q9HCC6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 AC007322.1-201ENST00000426983 750 ntBASIC17.12■□□□□ 0.33
HES4Q9HCC6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 AL356652.1-201ENST00000615962 565 ntBASIC17.12■□□□□ 0.33
HES4Q9HCC6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.12■□□□□ 0.33
HES4Q9HCC6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HES4Q9HCC6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 AC073130.3-201ENST00000624389 2278 ntBASIC17.11■□□□□ 0.33
HES4Q9HCC6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HES4Q9HCC6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
HES4Q9HCC6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 MCRIP2P1-201ENST00000394346 511 ntBASIC17.1■□□□□ 0.33
HES4Q9HCC6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 AC069236.1-201ENST00000604339 616 ntBASIC17.1■□□□□ 0.33
HES4Q9HCC6 IKBKGP1-201ENST00000612193 1073 ntBASIC17.1■□□□□ 0.33
HES4Q9HCC6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HES4Q9HCC6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HES4Q9HCC6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms