Protein–RNA interactions for Protein: Q9HCC0

MCCC2, Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCC2Q9HCC0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 AC027702.1-201ENST00000563810 1770 ntBASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MCCC2Q9HCC0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.71■□□□□ 0.58
MCCC2Q9HCC0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 AP006294.2-201ENST00000641667 209 ntBASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.7■□□□□ 0.58
MCCC2Q9HCC0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 RNA5SP413-201ENST00000516373 109 ntBASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 AP001160.3-201ENST00000601484 763 ntBASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.69■□□□□ 0.58
MCCC2Q9HCC0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 PRORSD1P-201ENST00000295112 541 ntBASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 AC098934.4-201ENST00000564127 592 ntBASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 AC011484.1-201ENST00000377652 1995 ntBASIC18.68■□□□□ 0.58
MCCC2Q9HCC0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 CNN2P6-201ENST00000439038 900 ntBASIC18.67■□□□□ 0.58
MCCC2Q9HCC0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms