Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 SMUG1P1-201ENST00000590640 811 ntBASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SND1-IT1Q9HBX3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SND1-IT1Q9HBX3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 TCF3P1-201ENST00000423021 1937 ntBASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 HTR7P1-202ENST00000624664 4411 ntBASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.53□□□□□ -0.24
SND1-IT1Q9HBX3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SND1-IT1Q9HBX3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SND1-IT1Q9HBX3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.52□□□□□ -0.24
SND1-IT1Q9HBX3 AP000974.1-201ENST00000623909 2387 ntBASIC13.52□□□□□ -0.24
SND1-IT1Q9HBX3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SND1-IT1Q9HBX3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SND1-IT1Q9HBX3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms