Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 HLA-B-256ENST00000639848 1089 ntBASIC23.92■■□□□ 1.42
RNF41Q9H4P4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RNF41Q9H4P4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
RNF41Q9H4P4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF41Q9H4P4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF41Q9H4P4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
RNF41Q9H4P4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF41Q9H4P4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF41Q9H4P4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF41Q9H4P4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF41Q9H4P4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.89■■□□□ 1.41
RNF41Q9H4P4 AC060766.5-201ENST00000590539 871 ntBASIC23.89■■□□□ 1.41
RNF41Q9H4P4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RNF41Q9H4P4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
RNF41Q9H4P4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF41Q9H4P4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF41Q9H4P4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF41Q9H4P4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RNF41Q9H4P4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF41Q9H4P4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 RNA5SP413-201ENST00000516373 109 ntBASIC23.86■■□□□ 1.41
RNF41Q9H4P4 AC023632.3-201ENST00000521633 145 ntBASIC23.86■■□□□ 1.41
RNF41Q9H4P4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF41Q9H4P4 AC092368.3-202ENST00000574180 1591 ntBASIC23.86■■□□□ 1.41
RNF41Q9H4P4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms