Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 AC013469.1-201ENST00000426985 403 ntBASIC22.28■■□□□ 1.16
RNF39Q9H2S5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 AC105020.6-201ENST00000621523 1217 ntBASIC22.28■■□□□ 1.16
RNF39Q9H2S5 AC138907.10-201ENST00000623708 983 ntBASIC22.28■■□□□ 1.16
RNF39Q9H2S5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RNF39Q9H2S5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 MTND2P11-201ENST00000423638 648 ntBASIC22.27■■□□□ 1.16
RNF39Q9H2S5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 AC079416.3-201ENST00000624479 549 ntBASIC22.27■■□□□ 1.16
RNF39Q9H2S5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF39Q9H2S5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RNF39Q9H2S5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 AC006058.3-201ENST00000606217 1069 ntBASIC22.26■■□□□ 1.15
RNF39Q9H2S5 RFC1-217ENST00000639695 867 ntTSL 5 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 AL024507.2-201ENST00000606070 2574 ntBASIC22.26■■□□□ 1.15
RNF39Q9H2S5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF39Q9H2S5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 AC026366.1-201ENST00000488803 879 ntBASIC22.25■■□□□ 1.15
RNF39Q9H2S5 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 AC025423.2-201ENST00000537570 439 ntBASIC22.25■■□□□ 1.15
RNF39Q9H2S5 AC060766.5-201ENST00000590539 871 ntBASIC22.25■■□□□ 1.15
RNF39Q9H2S5 AC008403.3-201ENST00000598924 454 ntBASIC22.25■■□□□ 1.15
RNF39Q9H2S5 AL451086.1-201ENST00000605596 223 ntBASIC22.25■■□□□ 1.15
RNF39Q9H2S5 AC009039.2-201ENST00000624524 529 ntBASIC22.25■■□□□ 1.15
RNF39Q9H2S5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 HLA-B-256ENST00000639848 1089 ntBASIC22.25■■□□□ 1.15
RNF39Q9H2S5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF39Q9H2S5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 AC034187.1-201ENST00000437047 561 ntTSL 4 BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 AC128676.1-201ENST00000454392 318 ntBASIC22.24■■□□□ 1.15
RNF39Q9H2S5 AC098590.1-201ENST00000468126 897 ntBASIC22.24■■□□□ 1.15
RNF39Q9H2S5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF39Q9H2S5 MTCYBP28-201ENST00000566728 1132 ntBASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms