Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 RBM17P2-201ENST00000616397 1405 ntBASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 AC091799.1-201ENST00000422823 811 ntBASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 AC007322.3-201ENST00000426526 701 ntBASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 KRT18P14-201ENST00000534205 1250 ntBASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR2J3Q9H1A7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 FAM21FP-204ENST00000608637 956 ntBASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR2J3Q9H1A7 TCF3P1-201ENST00000423021 1937 ntBASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 KRT19P1-201ENST00000405746 1186 ntBASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR2J3Q9H1A7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2J3Q9H1A7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms