Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 AL031432.3-201ENST00000607698 485 ntBASIC21.08■□□□□ 0.97
DDX47Q9H0S4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX47Q9H0S4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX47Q9H0S4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX47Q9H0S4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX47Q9H0S4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DDX47Q9H0S4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 AC110285.6-201ENST00000617652 491 ntBASIC21.07■□□□□ 0.96
DDX47Q9H0S4 MIR6084-201ENST00000622012 110 ntBASIC21.07■□□□□ 0.96
DDX47Q9H0S4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX47Q9H0S4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 DPP3P2-201ENST00000416030 1696 ntBASIC21.06■□□□□ 0.96
DDX47Q9H0S4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 AC008406.3-201ENST00000620001 1374 ntBASIC21.06■□□□□ 0.96
DDX47Q9H0S4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX47Q9H0S4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 AC010141.2-201ENST00000452426 721 ntBASIC21.05■□□□□ 0.96
DDX47Q9H0S4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
DDX47Q9H0S4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX47Q9H0S4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
DDX47Q9H0S4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX47Q9H0S4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX47Q9H0S4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX47Q9H0S4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX47Q9H0S4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX47Q9H0S4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX47Q9H0S4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms