Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
KLHL4Q9C0H6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KLHL4Q9C0H6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.48■□□□□ 0.71
KLHL4Q9C0H6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.48■□□□□ 0.71
KLHL4Q9C0H6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KLHL4Q9C0H6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 MIR6821-201ENST00000617625 74 ntBASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
KLHL4Q9C0H6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 AC097381.1-201ENST00000429019 1296 ntBASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 AC125437.2-201ENST00000625180 2167 ntBASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL4Q9C0H6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 IGHV3-19-201ENST00000521488 291 ntBASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 AP004607.7-201ENST00000527152 1677 ntBASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL4Q9C0H6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 AC087623.3-201ENST00000607047 1098 ntBASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 AC092666.2-201ENST00000613287 246 ntBASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL4Q9C0H6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
KLHL4Q9C0H6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
KLHL4Q9C0H6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KLHL4Q9C0H6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
KLHL4Q9C0H6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL4Q9C0H6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL4Q9C0H6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
KLHL4Q9C0H6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL4Q9C0H6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KLHL4Q9C0H6 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms