Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NKX6-2Q9C056 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
NKX6-2Q9C056 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 DUX4L18-201ENST00000553347 1267 ntBASIC16.37■□□□□ 0.21
NKX6-2Q9C056 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX6-2Q9C056 AP004607.7-201ENST00000527152 1677 ntBASIC16.37■□□□□ 0.21
NKX6-2Q9C056 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 OR7E47P-201ENST00000546390 1422 ntBASIC16.36■□□□□ 0.21
NKX6-2Q9C056 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 AL390961.4-201ENST00000623958 2535 ntBASIC16.36■□□□□ 0.21
NKX6-2Q9C056 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NKX6-2Q9C056 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 AC007225.1-201ENST00000566331 1836 ntBASIC16.35■□□□□ 0.21
NKX6-2Q9C056 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 AC012313.1-201ENST00000593393 3059 ntBASIC16.35■□□□□ 0.21
NKX6-2Q9C056 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 AC137630.3-201ENST00000607245 391 ntBASIC16.35■□□□□ 0.21
NKX6-2Q9C056 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NKX6-2Q9C056 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms