Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 FP700111.2-201ENST00000619190 1892 ntBASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 AC011484.1-201ENST00000377652 1995 ntBASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 AC092667.1-201ENST00000434301 2586 ntBASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
KRTAP4-3Q9BYR4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 Z99916.2-201ENST00000604037 246 ntBASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 AC069544.1-201ENST00000609399 999 ntBASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 AL023875.1-201ENST00000640777 796 ntBASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC6.9□□□□□ -1.3
KRTAP4-3Q9BYR4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 AC027702.1-201ENST00000563810 1770 ntBASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
KRTAP4-3Q9BYR4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 AL391422.3-201ENST00000603791 2761 ntBASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 TSPY15P-201ENST00000457163 923 ntBASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 RPS2P4-201ENST00000476944 856 ntBASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 MIR2861-201ENST00000636310 90 ntBASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
KRTAP4-3Q9BYR4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms