Protein–RNA interactions for Protein: Q9BVR0

HERC2P3, Putative HERC2-like protein 3, humanhuman

Predictions only

Length 1,158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3Q9BVR0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HERC2P3Q9BVR0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HERC2P3Q9BVR0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 AC113410.3-201ENST00000623366 203 ntBASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 KRT17P2-201ENST00000300992 1314 ntBASIC21.53■■□□□ 1.04
HERC2P3Q9BVR0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 ECEL1P3-201ENST00000427961 737 ntBASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HERC2P3Q9BVR0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.52■■□□□ 1.03
HERC2P3Q9BVR0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 BX088651.1-201ENST00000540551 451 ntBASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 AL121829.2-201ENST00000620908 328 ntBASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 REXO1L12P-201ENST00000622156 912 ntBASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2P3Q9BVR0 Z98882.1-201ENST00000622160 2253 ntBASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 MIR4785-201ENST00000585005 73 ntBASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
HERC2P3Q9BVR0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 AC211429.1-201ENST00000415277 523 ntBASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HERC2P3Q9BVR0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HERC2P3Q9BVR0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms