Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCM2Q9BSQ5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 DUSP5P2-201ENST00000426873 1033 ntBASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 AC097658.1-201ENST00000475555 843 ntBASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCM2Q9BSQ5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 C2orf69P4-201ENST00000565394 541 ntBASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCM2Q9BSQ5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 FEM1AP1-201ENST00000431297 1995 ntBASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 AC091874.3-201ENST00000512672 1195 ntBASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 AC098934.4-201ENST00000564127 592 ntBASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCM2Q9BSQ5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCM2Q9BSQ5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCM2Q9BSQ5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms