Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PAAF1Q9BRP4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PAAF1Q9BRP4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PAAF1Q9BRP4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.73■■□□□ 1.07
PAAF1Q9BRP4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.73■■□□□ 1.07
PAAF1Q9BRP4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PAAF1Q9BRP4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PAAF1Q9BRP4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PAAF1Q9BRP4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PAAF1Q9BRP4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 AL023875.1-201ENST00000640777 796 ntBASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PAAF1Q9BRP4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 Z99916.2-201ENST00000604037 246 ntBASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.71■■□□□ 1.07
PAAF1Q9BRP4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 AL390719.1-204ENST00000412397 1219 ntBASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PAAF1Q9BRP4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 AC124016.1-201ENST00000609552 612 ntBASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 AC124283.5-201ENST00000624661 1809 ntBASIC21.69■■□□□ 1.06
PAAF1Q9BRP4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.68■■□□□ 1.06
PAAF1Q9BRP4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.67■■□□□ 1.06
PAAF1Q9BRP4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms