Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 TPRG1LP1-201ENST00000598702 760 ntBASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMSS1Q9BQ75 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 AC245052.3-201ENST00000450182 901 ntBASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 AC079140.4-201ENST00000507448 529 ntBASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMSS1Q9BQ75 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 AC120498.10-201ENST00000621827 505 ntBASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 KRT87P-202ENST00000534226 1464 ntBASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMSS1Q9BQ75 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 RARRES2P11-201ENST00000635158 484 ntBASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CMSS1Q9BQ75 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMSS1Q9BQ75 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMSS1Q9BQ75 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMSS1Q9BQ75 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms