Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.23■□□□□ 0.67
CGREF1Q99674 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.23■□□□□ 0.67
CGREF1Q99674 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.23■□□□□ 0.67
CGREF1Q99674 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.23■□□□□ 0.67
CGREF1Q99674 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.23■□□□□ 0.67
CGREF1Q99674 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.23■□□□□ 0.67
CGREF1Q99674 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 AC010141.2-201ENST00000452426 721 ntBASIC19.23■□□□□ 0.67
CGREF1Q99674 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CGREF1Q99674 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGREF1Q99674 AC026471.1-201ENST00000564629 3026 ntBASIC19.22■□□□□ 0.67
CGREF1Q99674 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.22■□□□□ 0.67
CGREF1Q99674 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.22■□□□□ 0.67
CGREF1Q99674 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CGREF1Q99674 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.22■□□□□ 0.67
CGREF1Q99674 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.22■□□□□ 0.67
CGREF1Q99674 MIR6084-201ENST00000622012 110 ntBASIC19.22■□□□□ 0.67
CGREF1Q99674 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.22■□□□□ 0.67
CGREF1Q99674 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CGREF1Q99674 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CGREF1Q99674 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.22■□□□□ 0.67
CGREF1Q99674 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CGREF1Q99674 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CGREF1Q99674 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CGREF1Q99674 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CGREF1Q99674 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CGREF1Q99674 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CGREF1Q99674 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
CGREF1Q99674 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.21■□□□□ 0.67
CGREF1Q99674 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.21■□□□□ 0.67
CGREF1Q99674 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CGREF1Q99674 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.21■□□□□ 0.67
CGREF1Q99674 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CGREF1Q99674 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.21■□□□□ 0.67
CGREF1Q99674 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CGREF1Q99674 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.21■□□□□ 0.67
CGREF1Q99674 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CGREF1Q99674 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CGREF1Q99674 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.2■□□□□ 0.66
CGREF1Q99674 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.2■□□□□ 0.66
CGREF1Q99674 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.2■□□□□ 0.66
CGREF1Q99674 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGREF1Q99674 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGREF1Q99674 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CGREF1Q99674 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGREF1Q99674 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGREF1Q99674 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGREF1Q99674 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.19■□□□□ 0.66
CGREF1Q99674 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.19■□□□□ 0.66
CGREF1Q99674 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGREF1Q99674 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGREF1Q99674 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.19■□□□□ 0.66
CGREF1Q99674 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGREF1Q99674 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CGREF1Q99674 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CGREF1Q99674 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CGREF1Q99674 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGREF1Q99674 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.19■□□□□ 0.66
CGREF1Q99674 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
CGREF1Q99674 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms