Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 AP006587.3-201ENST00000525742 1516 ntBASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB3IPQ96QF0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 AC133637.1-201ENST00000624115 1537 ntBASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.75■□□□□ 0.75
RAB3IPQ96QF0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 TMEM179-206ENST00000616017 1645 ntBASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 AC010980.1-201ENST00000587192 1142 ntBASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 AL451085.2-201ENST00000605085 799 ntBASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 AC011484.1-201ENST00000377652 1995 ntBASIC19.74■□□□□ 0.75
RAB3IPQ96QF0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB3IPQ96QF0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 AL138781.2-201ENST00000617896 1843 ntBASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 AC007613.1-201ENST00000572811 2597 ntBASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 PVT1_1.1-201ENST00000615125 194 ntBASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB3IPQ96QF0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3IPQ96QF0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms