Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 AC005829.2-201ENST00000571422 1056 ntBASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A1Q96NT5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 AC133561.5-201ENST00000635547 218 ntBASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC46A1Q96NT5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 PKD1P6-201ENST00000343738 4769 ntBASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A1Q96NT5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 AC087633.2-202ENST00000565166 1439 ntBASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 AC087499.1-201ENST00000418141 1075 ntBASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC46A1Q96NT5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 KRASP1-201ENST00000407852 552 ntBASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 AC006557.6-201ENST00000623071 864 ntBASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 AC113410.3-201ENST00000623366 203 ntBASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC46A1Q96NT5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC46A1Q96NT5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms