Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SUSD3Q96L08 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUSD3Q96L08 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SUSD3Q96L08 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SUSD3Q96L08 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.55■■□□□ 1.04
SUSD3Q96L08 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.55■■□□□ 1.04
SUSD3Q96L08 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.55■■□□□ 1.04
SUSD3Q96L08 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.55■■□□□ 1.04
SUSD3Q96L08 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.55■■□□□ 1.04
SUSD3Q96L08 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.55■■□□□ 1.04
SUSD3Q96L08 FAM197Y4-202ENST00000622692 608 ntBASIC21.55■■□□□ 1.04
SUSD3Q96L08 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SUSD3Q96L08 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.55■■□□□ 1.04
SUSD3Q96L08 AL121603.2-201ENST00000557373 2117 ntBASIC21.55■■□□□ 1.04
SUSD3Q96L08 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SUSD3Q96L08 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SUSD3Q96L08 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SUSD3Q96L08 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SUSD3Q96L08 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SUSD3Q96L08 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.54■■□□□ 1.04
SUSD3Q96L08 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SUSD3Q96L08 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SUSD3Q96L08 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.54■■□□□ 1.04
SUSD3Q96L08 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SUSD3Q96L08 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.54■■□□□ 1.04
SUSD3Q96L08 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SUSD3Q96L08 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SUSD3Q96L08 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SUSD3Q96L08 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.54■■□□□ 1.04
SUSD3Q96L08 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SUSD3Q96L08 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.54■■□□□ 1.04
SUSD3Q96L08 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.54■■□□□ 1.04
SUSD3Q96L08 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SUSD3Q96L08 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SUSD3Q96L08 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.54■■□□□ 1.04
SUSD3Q96L08 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SUSD3Q96L08 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.53■■□□□ 1.04
SUSD3Q96L08 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.53■■□□□ 1.04
SUSD3Q96L08 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
SUSD3Q96L08 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.53■■□□□ 1.04
SUSD3Q96L08 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.53■■□□□ 1.04
SUSD3Q96L08 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.53■■□□□ 1.04
SUSD3Q96L08 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SUSD3Q96L08 AC006128.1-201ENST00000624704 1661 ntBASIC21.53■■□□□ 1.04
SUSD3Q96L08 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 AC008550.1-201ENST00000511500 884 ntBASIC21.52■■□□□ 1.04
SUSD3Q96L08 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SUSD3Q96L08 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SUSD3Q96L08 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.52■■□□□ 1.04
SUSD3Q96L08 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
SUSD3Q96L08 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.52■■□□□ 1.03
SUSD3Q96L08 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SUSD3Q96L08 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SUSD3Q96L08 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SUSD3Q96L08 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SUSD3Q96L08 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SUSD3Q96L08 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms