Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITCHQ96J02 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.26■□□□□ 0.67
ITCHQ96J02 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITCHQ96J02 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITCHQ96J02 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITCHQ96J02 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITCHQ96J02 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
ITCHQ96J02 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITCHQ96J02 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITCHQ96J02 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.26■□□□□ 0.67
ITCHQ96J02 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.26■□□□□ 0.67
ITCHQ96J02 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITCHQ96J02 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITCHQ96J02 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
ITCHQ96J02 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.25■□□□□ 0.67
ITCHQ96J02 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.25■□□□□ 0.67
ITCHQ96J02 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.25■□□□□ 0.67
ITCHQ96J02 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 AC087289.5-201ENST00000586076 3175 ntBASIC19.25■□□□□ 0.67
ITCHQ96J02 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.25■□□□□ 0.67
ITCHQ96J02 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.25■□□□□ 0.67
ITCHQ96J02 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ITCHQ96J02 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.25■□□□□ 0.67
ITCHQ96J02 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.25■□□□□ 0.67
ITCHQ96J02 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.25■□□□□ 0.67
ITCHQ96J02 AC005837.3-201ENST00000612163 286 ntBASIC19.25■□□□□ 0.67
ITCHQ96J02 AC243732.1-201ENST00000612648 864 ntBASIC19.25■□□□□ 0.67
ITCHQ96J02 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITCHQ96J02 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITCHQ96J02 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITCHQ96J02 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITCHQ96J02 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.24■□□□□ 0.67
ITCHQ96J02 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITCHQ96J02 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.24■□□□□ 0.67
ITCHQ96J02 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ITCHQ96J02 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITCHQ96J02 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITCHQ96J02 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITCHQ96J02 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.24■□□□□ 0.67
ITCHQ96J02 KRT8P36-201ENST00000489121 1440 ntBASIC19.24■□□□□ 0.67
ITCHQ96J02 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ITCHQ96J02 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.23■□□□□ 0.67
ITCHQ96J02 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.23■□□□□ 0.67
ITCHQ96J02 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.23■□□□□ 0.67
ITCHQ96J02 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ITCHQ96J02 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ITCHQ96J02 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ITCHQ96J02 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
ITCHQ96J02 AC091799.1-201ENST00000422823 811 ntBASIC19.23■□□□□ 0.67
ITCHQ96J02 AC007322.3-201ENST00000426526 701 ntBASIC19.23■□□□□ 0.67
ITCHQ96J02 AC123595.1-201ENST00000440769 1046 ntBASIC19.23■□□□□ 0.67
ITCHQ96J02 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.23■□□□□ 0.67
ITCHQ96J02 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.23■□□□□ 0.67
ITCHQ96J02 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.23■□□□□ 0.67
ITCHQ96J02 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.23■□□□□ 0.67
ITCHQ96J02 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ITCHQ96J02 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.23■□□□□ 0.67
ITCHQ96J02 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITCHQ96J02 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ITCHQ96J02 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ITCHQ96J02 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.22■□□□□ 0.67
ITCHQ96J02 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.22■□□□□ 0.67
ITCHQ96J02 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ITCHQ96J02 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.22■□□□□ 0.67
ITCHQ96J02 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.22■□□□□ 0.67
ITCHQ96J02 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.22■□□□□ 0.67
ITCHQ96J02 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.22■□□□□ 0.67
ITCHQ96J02 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms