Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 AC110285.5-201ENST00000611501 352 ntBASIC20.37■□□□□ 0.85
SIPA1Q96FS4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.37■□□□□ 0.85
SIPA1Q96FS4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 AC027702.1-201ENST00000563810 1770 ntBASIC20.36■□□□□ 0.85
SIPA1Q96FS4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 KRASP1-201ENST00000407852 552 ntBASIC20.36■□□□□ 0.85
SIPA1Q96FS4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 AC012618.2-201ENST00000428058 849 ntBASIC20.36■□□□□ 0.85
SIPA1Q96FS4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIPA1Q96FS4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 RPS2P55-201ENST00000397318 883 ntBASIC20.35■□□□□ 0.85
SIPA1Q96FS4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 AC107956.1-201ENST00000494359 873 ntBASIC20.35■□□□□ 0.85
SIPA1Q96FS4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 AC233702.5-201ENST00000584107 538 ntBASIC20.35■□□□□ 0.85
SIPA1Q96FS4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIPA1Q96FS4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIPA1Q96FS4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 PRKY-204ENST00000533551 1019 ntBASIC20.33■□□□□ 0.85
SIPA1Q96FS4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIPA1Q96FS4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SIPA1Q96FS4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SIPA1Q96FS4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.33■□□□□ 0.84
SIPA1Q96FS4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SIPA1Q96FS4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SIPA1Q96FS4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms