Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTHRC1Q96CG8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTHRC1Q96CG8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.83■□□□□ 0.61
CTHRC1Q96CG8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTHRC1Q96CG8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTHRC1Q96CG8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTHRC1Q96CG8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 AC104771.1-201ENST00000603335 964 ntBASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 AL109923.1-201ENST00000618799 583 ntBASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.83■□□□□ 0.6
CTHRC1Q96CG8 SMG8-203ENST00000578922 2178 ntBASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.82■□□□□ 0.6
CTHRC1Q96CG8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 AC073210.2-201ENST00000430369 194 ntBASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 AC142086.2-201ENST00000569753 217 ntBASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTHRC1Q96CG8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 MIR4758-201ENST00000577688 71 ntBASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTHRC1Q96CG8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms