Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP6NLQ92738 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP6NLQ92738 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.07■■□□□ 1.28
USP6NLQ92738 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.07■■□□□ 1.28
USP6NLQ92738 AL355355.2-201ENST00000442321 338 ntBASIC23.07■■□□□ 1.28
USP6NLQ92738 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.07■■□□□ 1.28
USP6NLQ92738 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.07■■□□□ 1.28
USP6NLQ92738 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USP6NLQ92738 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.07■■□□□ 1.28
USP6NLQ92738 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
USP6NLQ92738 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USP6NLQ92738 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6NLQ92738 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP6NLQ92738 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6NLQ92738 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP6NLQ92738 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6NLQ92738 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP6NLQ92738 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.06■■□□□ 1.28
USP6NLQ92738 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.06■■□□□ 1.28
USP6NLQ92738 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.06■■□□□ 1.28
USP6NLQ92738 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.06■■□□□ 1.28
USP6NLQ92738 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP6NLQ92738 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.06■■□□□ 1.28
USP6NLQ92738 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP6NLQ92738 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
USP6NLQ92738 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.05■■□□□ 1.28
USP6NLQ92738 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
USP6NLQ92738 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6NLQ92738 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.05■■□□□ 1.28
USP6NLQ92738 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6NLQ92738 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.05■■□□□ 1.28
USP6NLQ92738 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.05■■□□□ 1.28
USP6NLQ92738 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP6NLQ92738 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6NLQ92738 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP6NLQ92738 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.05■■□□□ 1.28
USP6NLQ92738 KRT18P35-201ENST00000510488 1269 ntBASIC23.05■■□□□ 1.28
USP6NLQ92738 AC023632.3-201ENST00000521633 145 ntBASIC23.05■■□□□ 1.28
USP6NLQ92738 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.05■■□□□ 1.28
USP6NLQ92738 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.05■■□□□ 1.28
USP6NLQ92738 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
USP6NLQ92738 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
USP6NLQ92738 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.05■■□□□ 1.28
USP6NLQ92738 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.05■■□□□ 1.28
USP6NLQ92738 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP6NLQ92738 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP6NLQ92738 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.04■■□□□ 1.28
USP6NLQ92738 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.04■■□□□ 1.28
USP6NLQ92738 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.04■■□□□ 1.28
USP6NLQ92738 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.04■■□□□ 1.28
USP6NLQ92738 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.04■■□□□ 1.28
USP6NLQ92738 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP6NLQ92738 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.04■■□□□ 1.28
USP6NLQ92738 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
USP6NLQ92738 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.04■■□□□ 1.28
USP6NLQ92738 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP6NLQ92738 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.04■■□□□ 1.28
USP6NLQ92738 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6NLQ92738 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6NLQ92738 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6NLQ92738 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.03■■□□□ 1.28
USP6NLQ92738 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP6NLQ92738 FAM197Y1-201ENST00000421178 764 ntBASIC23.03■■□□□ 1.28
USP6NLQ92738 AL353807.1-201ENST00000427475 662 ntBASIC23.03■■□□□ 1.28
USP6NLQ92738 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.03■■□□□ 1.28
USP6NLQ92738 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.03■■□□□ 1.28
USP6NLQ92738 AC145285.6-201ENST00000604632 637 ntBASIC23.03■■□□□ 1.28
USP6NLQ92738 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.03■■□□□ 1.28
USP6NLQ92738 AC233723.2-201ENST00000623798 2106 ntBASIC23.03■■□□□ 1.28
USP6NLQ92738 NBPF21P-201ENST00000425093 1451 ntBASIC23.03■■□□□ 1.28
USP6NLQ92738 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.03■■□□□ 1.28
USP6NLQ92738 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.02■■□□□ 1.28
USP6NLQ92738 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
USP6NLQ92738 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.02■■□□□ 1.28
USP6NLQ92738 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.02■■□□□ 1.28
USP6NLQ92738 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.02■■□□□ 1.28
USP6NLQ92738 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
USP6NLQ92738 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
USP6NLQ92738 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP6NLQ92738 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6NLQ92738 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6NLQ92738 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6NLQ92738 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
USP6NLQ92738 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
USP6NLQ92738 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
USP6NLQ92738 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.01■■□□□ 1.27
USP6NLQ92738 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.01■■□□□ 1.27
USP6NLQ92738 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
USP6NLQ92738 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
USP6NLQ92738 AC073195.1-201ENST00000607241 877 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms