Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40AQ8WXH6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40AQ8WXH6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RAB40AQ8WXH6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB40AQ8WXH6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 TCF3P1-201ENST00000423021 1937 ntBASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB40AQ8WXH6 AP004607.4-201ENST00000530158 1459 ntBASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB40AQ8WXH6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 AC011484.1-201ENST00000377652 1995 ntBASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB40AQ8WXH6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 AC004854.2-201ENST00000608450 1441 ntBASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 KRT19P1-201ENST00000405746 1186 ntBASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB40AQ8WXH6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB40AQ8WXH6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms