Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.77■□□□□ 0.76
ATL1Q8WXF7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATL1Q8WXF7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.77■□□□□ 0.75
ATL1Q8WXF7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ATL1Q8WXF7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 AC004911.1-201ENST00000416316 871 ntBASIC19.76■□□□□ 0.75
ATL1Q8WXF7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 AC005181.1-201ENST00000604782 1256 ntBASIC19.76■□□□□ 0.75
ATL1Q8WXF7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.76■□□□□ 0.75
ATL1Q8WXF7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATL1Q8WXF7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 AC073111.5-205ENST00000641717 521 ntBASIC19.74■□□□□ 0.75
ATL1Q8WXF7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATL1Q8WXF7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 AL512625.2-201ENST00000417533 625 ntBASIC19.73■□□□□ 0.75
ATL1Q8WXF7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATL1Q8WXF7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 AC026185.1-201ENST00000445748 174 ntBASIC19.72■□□□□ 0.75
ATL1Q8WXF7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATL1Q8WXF7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms