Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCG3Q8WXD2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCG3Q8WXD2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.65■□□□□ 0.9
SCG3Q8WXD2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 AC011484.1-201ENST00000377652 1995 ntBASIC20.65■□□□□ 0.9
SCG3Q8WXD2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 AC007322.4-201ENST00000509611 723 ntBASIC20.65■□□□□ 0.9
SCG3Q8WXD2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCG3Q8WXD2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SCG3Q8WXD2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.64■□□□□ 0.9
SCG3Q8WXD2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCG3Q8WXD2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.64■□□□□ 0.9
SCG3Q8WXD2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCG3Q8WXD2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.64■□□□□ 0.9
SCG3Q8WXD2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.9
SCG3Q8WXD2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 AC245052.3-201ENST00000450182 901 ntBASIC20.64■□□□□ 0.89
SCG3Q8WXD2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 CD99P1-205ENST00000527459 561 ntBASIC20.64■□□□□ 0.89
SCG3Q8WXD2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 AC069236.1-201ENST00000604339 616 ntBASIC20.64■□□□□ 0.89
SCG3Q8WXD2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.64■□□□□ 0.89
SCG3Q8WXD2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 PLK5-205ENST00000642079 1969 ntBASIC20.63■□□□□ 0.89
SCG3Q8WXD2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG3Q8WXD2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms