Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
C1orf54Q8WWF1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.03■□□□□ 0.96
C1orf54Q8WWF1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.03■□□□□ 0.96
C1orf54Q8WWF1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C1orf54Q8WWF1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.03■□□□□ 0.96
C1orf54Q8WWF1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C1orf54Q8WWF1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 AC125437.2-201ENST00000625180 2167 ntBASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 AC007322.3-201ENST00000426526 701 ntBASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 KRT8P36-201ENST00000489121 1440 ntBASIC21.02■□□□□ 0.96
C1orf54Q8WWF1 DPP3P2-201ENST00000416030 1696 ntBASIC21.02■□□□□ 0.95
C1orf54Q8WWF1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
C1orf54Q8WWF1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
C1orf54Q8WWF1 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 AC243732.1-201ENST00000612648 864 ntBASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
C1orf54Q8WWF1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
C1orf54Q8WWF1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C1orf54Q8WWF1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21■□□□□ 0.95
C1orf54Q8WWF1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21■□□□□ 0.95
C1orf54Q8WWF1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C1orf54Q8WWF1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21■□□□□ 0.95
C1orf54Q8WWF1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
C1orf54Q8WWF1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21■□□□□ 0.95
C1orf54Q8WWF1 KRT18P61-201ENST00000585825 1298 ntBASIC21■□□□□ 0.95
C1orf54Q8WWF1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21■□□□□ 0.95
C1orf54Q8WWF1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21■□□□□ 0.95
C1orf54Q8WWF1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
C1orf54Q8WWF1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C1orf54Q8WWF1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C1orf54Q8WWF1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C1orf54Q8WWF1 AC019069.1-201ENST00000610008 1333 ntBASIC21■□□□□ 0.95
C1orf54Q8WWF1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21■□□□□ 0.95
C1orf54Q8WWF1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C1orf54Q8WWF1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
C1orf54Q8WWF1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 AL158211.5-201ENST00000623583 2518 ntBASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.98■□□□□ 0.95
C1orf54Q8WWF1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms