Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
STAG1Q8WVM7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
STAG1Q8WVM7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 POU5F1P3-201ENST00000428824 1078 ntBASIC23.91■■□□□ 1.42
STAG1Q8WVM7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
STAG1Q8WVM7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 AC073314.1-201ENST00000568729 2216 ntBASIC23.9■■□□□ 1.42
STAG1Q8WVM7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 PTBP1P-201ENST00000554374 1601 ntBASIC23.9■■□□□ 1.42
STAG1Q8WVM7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
STAG1Q8WVM7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
STAG1Q8WVM7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
STAG1Q8WVM7 FEM1AP1-201ENST00000431297 1995 ntBASIC23.89■■□□□ 1.42
STAG1Q8WVM7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
STAG1Q8WVM7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 AC060766.5-201ENST00000590539 871 ntBASIC23.89■■□□□ 1.41
STAG1Q8WVM7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 AP005212.1-201ENST00000581547 1997 ntBASIC23.89■■□□□ 1.41
STAG1Q8WVM7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
STAG1Q8WVM7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
STAG1Q8WVM7 AC020907.5-201ENST00000624372 1936 ntBASIC23.88■■□□□ 1.41
STAG1Q8WVM7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.87■■□□□ 1.41
STAG1Q8WVM7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
STAG1Q8WVM7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
STAG1Q8WVM7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.85■■□□□ 1.41
STAG1Q8WVM7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms