Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 AC061975.6-201ENST00000579045 1553 ntBASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB3IL1Q8TBN0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 AL136116.3-201ENST00000402907 1138 ntBASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 AC090340.1-201ENST00000620778 4980 ntBASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB3IL1Q8TBN0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 AC125437.2-201ENST00000625180 2167 ntBASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 AC126544.1-201ENST00000580842 1059 ntBASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB3IL1Q8TBN0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 AC105233.4-201ENST00000642045 216 ntBASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB3IL1Q8TBN0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 MIR2861-201ENST00000636310 90 ntBASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 AC087289.5-201ENST00000586076 3175 ntBASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB3IL1Q8TBN0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms