Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 SLC25A24-204ENST00000569674 2357 ntBASIC18.96■□□□□ 0.63
NUP43Q8NFH3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
NUP43Q8NFH3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 AL391422.3-201ENST00000603791 2761 ntBASIC18.95■□□□□ 0.62
NUP43Q8NFH3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 SMG8-203ENST00000578922 2178 ntBASIC18.95■□□□□ 0.62
NUP43Q8NFH3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.95■□□□□ 0.62
NUP43Q8NFH3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 MCRIP2P1-201ENST00000394346 511 ntBASIC18.94■□□□□ 0.62
NUP43Q8NFH3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.94■□□□□ 0.62
NUP43Q8NFH3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 AC069236.1-201ENST00000604339 616 ntBASIC18.94■□□□□ 0.62
NUP43Q8NFH3 IKBKGP1-201ENST00000612193 1073 ntBASIC18.94■□□□□ 0.62
NUP43Q8NFH3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 AC100791.3-201ENST00000617619 330 ntBASIC18.94■□□□□ 0.62
NUP43Q8NFH3 AC008694.1-202ENST00000636953 945 ntBASIC18.94■□□□□ 0.62
NUP43Q8NFH3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 DPP3P2-201ENST00000416030 1696 ntBASIC18.94■□□□□ 0.62
NUP43Q8NFH3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 AC099778.1-201ENST00000568593 1911 ntBASIC18.94■□□□□ 0.62
NUP43Q8NFH3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NUP43Q8NFH3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.93■□□□□ 0.62
NUP43Q8NFH3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms