Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX31Q8N9S9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 KRT18P5-201ENST00000436075 1291 ntBASIC19.93■□□□□ 0.78
SNX31Q8N9S9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 AC137761.2-201ENST00000561729 223 ntBASIC19.93■□□□□ 0.78
SNX31Q8N9S9 AC145350.3-201ENST00000569033 163 ntBASIC19.93■□□□□ 0.78
SNX31Q8N9S9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 AC243732.1-201ENST00000612648 864 ntBASIC19.93■□□□□ 0.78
SNX31Q8N9S9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX31Q8N9S9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 AC091799.1-201ENST00000422823 811 ntBASIC19.92■□□□□ 0.78
SNX31Q8N9S9 AC026271.2-201ENST00000428091 497 ntBASIC19.92■□□□□ 0.78
SNX31Q8N9S9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNX31Q8N9S9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX31Q8N9S9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 AC007322.3-201ENST00000426526 701 ntBASIC19.9■□□□□ 0.78
SNX31Q8N9S9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNX31Q8N9S9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms