Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 PGM5P4-201ENST00000421970 445 ntBASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 AC099778.1-201ENST00000568593 1911 ntBASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSMEM1Q8N8F7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 AC006015.1-201ENST00000429970 570 ntBASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSMEM1Q8N8F7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 MFSD11-216ENST00000590393 1141 ntBASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSMEM1Q8N8F7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 LETM1P2-201ENST00000597330 2178 ntBASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 AC087633.2-202ENST00000565166 1439 ntBASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LSMEM1Q8N8F7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LSMEM1Q8N8F7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
LSMEM1Q8N8F7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 AC016769.1-201ENST00000409132 1010 ntBASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.51■□□□□ 0.55
LSMEM1Q8N8F7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms