Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 DUX4L6-201ENST00000626483 1275 ntBASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 DUX4L1-201ENST00000627662 1275 ntBASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 DUX4L8-201ENST00000629013 1275 ntBASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 DUX4L3-201ENST00000630187 1275 ntBASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 DUX4L7-201ENST00000630678 1275 ntBASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 DUX4L5-201ENST00000630834 1275 ntBASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DEPDC4Q8N2C3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 BX323043.1-201ENST00000641006 1765 ntBASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DEPDC4Q8N2C3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DEPDC4Q8N2C3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 AC087289.5-201ENST00000586076 3175 ntBASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 AC011484.1-201ENST00000377652 1995 ntBASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 KRT18P5-201ENST00000436075 1291 ntBASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 NTF6G-201ENST00000591094 616 ntBASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DEPDC4Q8N2C3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 SMUG1P1-201ENST00000590640 811 ntBASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
DEPDC4Q8N2C3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 AL137784.2-201ENST00000607332 1000 ntBASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 TCF3P1-201ENST00000423021 1937 ntBASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 AC018445.3-201ENST00000624177 1945 ntBASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DEPDC4Q8N2C3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms