Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 AC098934.4-201ENST00000564127 592 ntBASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 AC142086.2-201ENST00000569753 217 ntBASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCUBE3Q8IX30 AC020907.5-201ENST00000624372 1936 ntBASIC21.33■■□□□ 1
SCUBE3Q8IX30 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.33■■□□□ 1
SCUBE3Q8IX30 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SCUBE3Q8IX30 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SCUBE3Q8IX30 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.33■■□□□ 1
SCUBE3Q8IX30 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.33■■□□□ 1
SCUBE3Q8IX30 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SCUBE3Q8IX30 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCUBE3Q8IX30 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SCUBE3Q8IX30 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCUBE3Q8IX30 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.32■■□□□ 1
SCUBE3Q8IX30 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCUBE3Q8IX30 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCUBE3Q8IX30 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCUBE3Q8IX30 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SCUBE3Q8IX30 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.31■■□□□ 1
SCUBE3Q8IX30 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.31■■□□□ 1
SCUBE3Q8IX30 DUSP5P2-201ENST00000426873 1033 ntBASIC21.31■■□□□ 1
SCUBE3Q8IX30 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.31■■□□□ 1
SCUBE3Q8IX30 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.31■■□□□ 1
SCUBE3Q8IX30 AC066615.1-201ENST00000640911 628 ntBASIC21.31■■□□□ 1
SCUBE3Q8IX30 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.31■■□□□ 1
SCUBE3Q8IX30 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SCUBE3Q8IX30 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCUBE3Q8IX30 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCUBE3Q8IX30 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.3■■□□□ 1
SCUBE3Q8IX30 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCUBE3Q8IX30 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCUBE3Q8IX30 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.3■■□□□ 1
SCUBE3Q8IX30 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 AC091874.3-201ENST00000512672 1195 ntBASIC21.29■■□□□ 1
SCUBE3Q8IX30 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 C2orf69P4-201ENST00000565394 541 ntBASIC21.29■■□□□ 1
SCUBE3Q8IX30 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.29■■□□□ 1
SCUBE3Q8IX30 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCUBE3Q8IX30 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE3Q8IX30 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE3Q8IX30 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE3Q8IX30 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms