Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 AL356652.1-201ENST00000615962 565 ntBASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 DPP3P2-201ENST00000416030 1696 ntBASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 CYP21A1P-202ENST00000354927 1481 ntBASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 AC016405.3-201ENST00000607710 860 ntBASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDKL3Q8IVW4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CDKL3Q8IVW4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.79■□□□□ 0.92
CDKL3Q8IVW4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms