Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NUDCD3Q8IVD9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NUDCD3Q8IVD9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.08■□□□□ 0.81
NUDCD3Q8IVD9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NUDCD3Q8IVD9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NUDCD3Q8IVD9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.08■□□□□ 0.81
NUDCD3Q8IVD9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NUDCD3Q8IVD9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NUDCD3Q8IVD9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.08■□□□□ 0.8
NUDCD3Q8IVD9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.08■□□□□ 0.8
NUDCD3Q8IVD9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
NUDCD3Q8IVD9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.08■□□□□ 0.8
NUDCD3Q8IVD9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NUDCD3Q8IVD9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NUDCD3Q8IVD9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 AC116050.2-201ENST00000612102 1779 ntBASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 AC098818.2-201ENST00000564925 2320 ntBASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NUDCD3Q8IVD9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 KRT16P2-201ENST00000414673 1423 ntBASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 AC012414.1-201ENST00000556676 535 ntBASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NUDCD3Q8IVD9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUDCD3Q8IVD9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms