Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.08■■□□□ 1.61
CHD1LQ86WJ1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHD1LQ86WJ1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.08■■□□□ 1.6
CHD1LQ86WJ1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
CHD1LQ86WJ1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 AC016769.1-201ENST00000409132 1010 ntBASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1LQ86WJ1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 AL162430.1-201ENST00000480705 870 ntBASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC25.06■■□□□ 1.6
CHD1LQ86WJ1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 AC068338.2-201ENST00000563278 1430 ntBASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.05■■□□□ 1.6
CHD1LQ86WJ1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 PGM5P4-201ENST00000421970 445 ntBASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 RARRES2P4-201ENST00000514074 484 ntBASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1LQ86WJ1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1LQ86WJ1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.02■■□□□ 1.6
CHD1LQ86WJ1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms