Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
ZNF550Q7Z398 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF550Q7Z398 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ZNF550Q7Z398 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 AL109923.1-201ENST00000618799 583 ntBASIC18.64■□□□□ 0.57
ZNF550Q7Z398 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF550Q7Z398 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 AL162377.1-201ENST00000618844 1793 ntBASIC18.63■□□□□ 0.57
ZNF550Q7Z398 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 AL355802.2-201ENST00000402069 882 ntBASIC18.63■□□□□ 0.57
ZNF550Q7Z398 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZNF550Q7Z398 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 AL512408.1-201ENST00000569378 2000 ntBASIC18.62■□□□□ 0.57
ZNF550Q7Z398 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.62■□□□□ 0.57
ZNF550Q7Z398 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF550Q7Z398 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms